果蠅緯度相關晝夜節律特徵:穩定性、活動量分佈與演化意義
Latitude-Dependent Circadian Traits in Drosophila: Stability, Activity Peaks, and Evolutionary Implications
生物時鐘可對生物體的行為與生理造成影響,在探討晝夜節律特徵的差異時,過去研究常侷限於北美大陸的品系,缺少赤道及南半球品系的晝夜節律特徵探討。有鑒於黑腹果蠅在全球各大洲的廣泛分佈,因此我們以黑腹果蠅(近赤道與中高緯度品系)為材料,研究果蠅是否因緯度而有相異的晝夜節律特徵?結果顯示不同緯度的果蠅品系展現出相異的晝夜節律特徵。赤報品系在全暗狀態下仍維持原本光暗12小時的穩定節律,而南北半球的中高緯度品系則具有相似節律特徵,即在全暗狀態下的節律不對齊原本正常光源的穩定節律,其他如活動量、週期、及節律強度等皆有著品系間的差異。更進一步比對實驗中各個品系基因序列,研究發現per和tim在調控區段有許多SNP變異,顯示其與晝夜節律特徵的關係,有助於後續尋找更多造成晝夜節律特徵差異的可能遺傳變異並探討。
BeeMind AI: Development of an AI-Based System to Assess Honeybee Health, Behavior, and Nutrient Effects on Learning and Memory
Due to their pollination services, honeybees are one of the most ecologically vital animals, being singlehandedly responsible for nearly 80% of global agricultural pollination [1]. However, in recent years, they have experienced large declines in populations, and as a survey reported roughly 50% of beekeepers in the US lost their honeybee colonies [2]. These losses are experienced globally due to a combination of many factors, including but not limited to habitat loss, pesticides, climate change, and other invasive species [3, 4]. One of the biggest factors attributed to the decline of honeybee colonies is the usage of pesticides, specifically neonicotinoids [3-6]. Neonicotinoid compounds have been used globally since their introduction in the early 1990s [4]. Studies have shown that neonicotinoids can have both sublethal and lethal effects on honeybees, depending on the dosages that they are exposed to, as neonicotinoids bind to nervous system receptors of honeybees [7]. These effects can range from behavior changes to altered motor functions [7-9]. Among the reported effects, one of the more significant ones is the effect of neonicotinoids on honeybee learning and memory [10, 11]. Additionally, there is a lack of availability for methods of monitoring of honeybee hives, essentially meaning that the only methods to track honeybee health are through obtrusive physical methods of inspection. This paper aims to develop a novel AI-based honeybee health assessment system, able to monitor beehives using the following functions: continuous temperature and humidity monitoring both inside and outside the hive, as well as video and audio recording to assess honeybee health as well as population. In addition, this system can be used for honeybee-related studies such as nutrition effects and evaluation on health, learning, and memory. To do this, four types of nutrition have been studied and their effects have been analyzed by a deep learning approach.
KidneyLifePlus+ : Retinal Imaging Analysis for Kidney Disease Risk Assessment
Chronic kidney disease (CKD) represents a significant public health challenge, often referred to as a “silent disease” due to its asymptomatic progression during early stages (1–2). Consequently, most diagnoses occur during advanced stages (3 and beyond), where treatment options are more complex and outcomes are less favorable. Globally, CKD affects over 850 million individuals, with 434.3 million cases in Asia alone. Despite its prevalence, early-stage awareness remains alarmingly low, with only 5% of affected individuals aware of their condition. Existing screening methods are predominantly hospital-based, expensive, and time-intensive, limiting their accessibility, particularly in resource-constrained settings. This underscores an urgent need for more accessible and efficient diagnostic tools to enable early intervention. In response to this critical problem, we developed KidneyLifePlus+, an AI-powered platform that leverages advanced machine learning models, including U-net, ResNet-50, and YOLO v8, to analyze retinal images for early CKD detection. These models are integrated to ensure high screening accuracy by identifying subtle biomarkers indicative of CKD progression. Complementing the software, we designed proprietary hardware capable of capturing high-resolution retinal images, delivering performance comparable to hospital-grade equipment. By ensuring affordability and ease of use, the system extends screening capabilities beyond clinical environments, making it suitable for deployment in community healthcare settings. KidneyLifePlus+ addresses key limitations of traditional methods by offering a rapid, cost-effective, and highly accurate diagnostic solution. The platform’s potential to enhance early detection rates could significantly improve clinical outcomes and quality of life for CKD patients. Furthermore, this innovation contributes to global efforts to reduce the burden of CKD by promoting equitable access to diagnostic services, particularly in underserved regions.
Reviving Resources: Harnessing Soap Nut Greywater for Sustainable Plant Growth
Due to widespread water shortages, there is an increasing need for innovative water conservation strategies, such as reusing greywater from laundry. The World Health Organization (WHO) recognizes greywater as suitable for plant irrigation, but commercial laundry detergents contain synthetic chemicals that can harm both the environment and plant health. Soap nuts, derived from the Sapindus mukorossi tree, offer a natural alternative. Their pericarp is rich in triterpenoid saponins, amphiphilic compounds, composed of hydrophilic sugar group and hydrophobic triterpenoid sapogenins. These saponins mimic the chemical structure of surfactants in detergents, allowing soap nuts to act as natural foaming and surface-active agents in water. As a result, soap nuts have long been used as a sustainable option for shampoo and laundry detergent in many Asian countries (Sochacki & Vogt, 2022). Greywater, an often overlooked resource, is generated from household activities like laundry, showers, and basins. Unlike blackwater, it contains lower levels of pathogens and bacteria. However, due to a lack of awareness, greywater is frequently mixed with blackwater and directed to the same sewage treatment systems (Greywater Systems: From Recycling to Filtration, n.d.). Greywater accounts for 50-80% of a household’s daily wastewater (Wong, 2011). Repurposing greywater offers a promising and sustainable solution to address water conservation challenges.
Decoding Climate Resilience: Functional Profiling of Protein Phosphatase 2C Family Genes for Abiotic Stress Tolerance in Rice
Problem • Rice is the primary cereal crop consumed by nearly half the population worldwide • By 2050, there will be a 50% increase in demand for rice • The world’s poor populations depend more on rice, both for income and consumption, than any other food. Rice is the single-largest source of employment and income for rural people • Worldwide, 51–82% of agricultural crop yield is lost annually due to abiotic stress due to climate change • Climate change causes extreme temperatures, erratic rainfall, dangerous droughts, and increased salinity from rising sea levels Solution • To adapt to abiotic stress, rice has intricate signaling pathways, particularly those mediated by the phytohormone abscisic acid (ABA), that cause an increase in stress tolerance • Clade A genes of the Protein Phosphatase 2C (PP2C) gene family are known to be negative regulators of the ABA signaling pathway. • “Deleting” these genes activates the ABA pathway and increases stress tolerance in rice without inducing stress CRISPR gene editing technology is the ideal solution Research Goal • While the role of PP2C genes in stress response is recognized, there is a gap in understanding the specific genes within this family that contribute significantly to stress signaling. Furthermore, there is a need for a detailed investigation into the effects of targeted CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) genome editing on rice stress response pathways.